SE2850351

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9356
  • Sorghum bicolor
  • SE2850351
  • PIF/harbinger
  • To26
  • chromosome_4:61709997-61710244
  • TAA
  • AGGCCTTGTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               CTCAAAAACTACCAAAAATT          CCCGTCACATCGAATCTTAGGACACATGCATGAAGCATTAAATATGGATAAAAATATAAACTAATTACACAGTTTACCTGTAAATC
  AGGCCTTGTTTAGTT                    TTCAAGATTC                                                                                      
  |||||||||||||||                    ||||||||||                                                                                      G
  TCCGGAACAAGTCAA                    CGCTTTTTAA                                                                                      
AA               -------------------A          AACCGAAGCTCATGGCATCGTGAAAGCAAACAAACACCGTTTATAAGAGGTTAGTATCTGATTGATCCCAGTTTTCTAAGAAGAGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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