SE2850368

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9373
  • Sorghum bicolor
  • SE2850368
  • PIF/harbinger
  • To4
  • chromosome_2:69987584-69987821
  • TTA
  • AGGCCTTGTTTAGTTTGCAAATTTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                     TT    -    TTTGGCTACTGTAGCACTTTCGTTTTTATTTGACAAACATTGTCCAATCATAAAGTAACTAGGCTCAAAAGATTCATCTCACAAA
  AGGCCTTGTTTAGTTTGCAAA  TTTT AGTT                                                                                     
  |||||||||||||||||||||  |||| ||||                                                                                     T
  TCCGGAACAAATCAAACGTTT  AAAA TTCT                                                                                     
AT                     TT    G    AAGAGGCAGTGTAGCTTAGAAACCAGCATACGTACCTCGTAATTTATATCTGCTTTTATTTTTGATTAATGTGTCAAATGGATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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