SE2830374

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9379
  • Sorghum bicolor
  • SE2830374
  • hAT
  • Hat31
  • chromosome_2:20615776-20615942
  • GTCTAAAG
  • AGCATAGTTCTCAAGGCGT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCTAA G         CAA     --    -     GACGCCTAGGCGTCCAGGCGCCCCCCATCGCCTTGCAGAATGGGCACC
      A CATAGTTCT   GGCGT  CGCC TAGGC                                                
      | |||||||||   |||||  |||| |||||                                                 
      T GTATCAAGA   CCGCA  TCCG TCCGT                                                
GAAATC G         ATG     TT    C     GCCGCTACCCCCCGCGGACCTGCGGATCCGCGGGCGGAACGGACGGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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