SE2850385

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9390
  • Sorghum bicolor
  • SE2850385
  • PIF/harbinger
  • To2
  • chromosome_9:51944165-51944403
  • TTA
  • AGGCCTTGTTTAGTTTGCAAAATTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                      TT   -   TTT   GCTACTGTAGCACTTTCGTTTTTATTTGACAAATATTGTCCAATCACGGAGTAACTAGGCTCAAAAGATTCATCTCACAAAT
  AGGCCTTGTTTAGTTTGCAAAA  TTT GCT   TAG                                                                                  
  ||||||||||||||||||||||  ||| |||   |||                                                                                  T
  TCCGGAACAAATCAAGCGTTTT  AAA TTC   TAA                                                                                  
AT                      TT   G   ---   GAGGTAGTGTAGCTTAAAAACCAGCGTACGTACCTCGTAATTTATATCTGCTTTTATTTTTGATTAACGTGTCAAATAGACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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