SE2850426

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9431
  • Sorghum bicolor
  • SE2850426
  • PIF/harbinger
  • To38
  • chromosome_2:12487381-12487681
  • TAA
  • AGGCCAGTCTCAATGGGGAGTTTCATAGCGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 G         - C   ---------       --A   TGCCATGTCATGTGAAATGAAATGAAACTTGAATGAAACACCCACTCTCAATAGAGAGTTTCATTTTATAGTTTCATAGGCATTTAATTCTAAGACTCAT
  AGGCCAGTCTCAATGGG AGTTTCATA G GTT         GTTTCCA   GAC                                                                                                    
  ||||||||||||||||| ||||||||| | |||         |||||||   |||                                                                                                     
  TCCGGTCAGAGTTACCC TCAAAGTAT C CAA         AATTTAT   ACG                                                                                                    
AA                 -         A T   AGTAAACGT       CCA   GTGTATCCGAAAAGACTACTGTACCGTCACATAAATTCTTCTCTCTCTTCTTTACTCAAAGTAGATCTACTTTGAGAGAACCGTGCTAATGGTTGAGAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3