SE2850428

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9433
  • Sorghum bicolor
  • SE2850428
  • PIF/harbinger
  • To59
  • chromosome_4:7342113-7342245
  • TAA
  • GGCCTTGTTCGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TAA     T        GACA     TGAGGGTGGGAATTGTTCCAGCTAATCTATATTAGTAGAAAT
    GGCCT GTTCGTTT    GGGTT                                          
    ||||| ||||||||    |||||                                          A
    CCGGG CAAGCAAA    GTAGG                                          
AATC     -        ----     CCTAACCTACGGGACCTTAATAAGGTCCACCTAACTATCCAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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