SE2830469

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9474
  • Sorghum bicolor
  • SE2830469
  • hAT
  • Hat31
  • chromosome_3:50590869-50591016
  • TTCACAGG
  • GGCATAGTTCTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCACA             AT    AA     AGGCATGACATTGCGCCACCGCCTGGACGCCTAGGCGAGCATTT
      GGCATAGTTCTTA  GCGT  AGGCG                                            
      |||||||||||||  ||||  |||||                                             
      TTGTATCAAGAAT  TCCG  CAGCG                                            
GGACAC             --    --     GATCCGCTGCGGATCCGCAGGTCCGCTGGGGGGTCACGGAACGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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