SE2850470

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9475
  • Sorghum bicolor
  • SE2850470
  • PIF/harbinger
  • To3
  • chromosome_1:24941145-24941387
  • CTG
  • GGGCCTTGTTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
CT      T     - -       AAAAATTCGGATTTTGAGATTGTAGCAATTTCGTTTTTATTTGACAAACATTGTCCAATCATACAGTAATTAGGCTTAAAAAATTCATCTCACGATTT
  GGGCCT GTTTA G ATCCGAA                                                                                                  
  |||||| ||||| | |||||||                                                                                                  A
  CCCGGA CAAGT G CTTTTAG                                                                                                  
GT      T     G G       TTTTTGAAAAATTCTAAGAGGCAGTGTAATTTAGAACGCTATATACATACCTCGTAATTTATATCTACTTTTGTTTTTGATTAACGTCTCAAATAGAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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