SE2850471

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9476
  • Sorghum bicolor
  • SE2850471
  • PIF/harbinger
  • To63
  • chromosome_2:66994074-66994301
  • TAA
  • AGGGGCTGTTTGGTTCATAGCCCACGCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA     C          A     -   ---   A     CCAAG  G G       CGAAGGCTGTGGCGTGAGAAATGGCCGCCACAGGTGTGGCTGAAATAAGCATACAAATGAA
  AGGGG TGTTTGGTTC TAGCC CAC   GCC GCCAT     TT T GCGCCGC                                                             
  ||||| |||||||||| ||||| |||   ||| |||||     || | |||||||                                                             C
  TCCCC ACAAACCAAG GTCGG GTG   TGG GCGGT     CT A CACCGAC                                                             
AA     C          C     T   TAA   A     ---AC  - -       GGTGTTGTCAAACCAACAACAAATCAATTACGTATTCAACACCGCCGATATGAAAAAGGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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