SE2810481

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9486
  • Sorghum bicolor
  • SE2810481
  • Tc1/Mariner
  • St8
  • chromosome_3:2193394-2193555
  • TA
  • TACTCCCTCCATTCCAAATTATAAGACATTTTGGCTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
        C                  A          -------        CGTTGCTTTTACTATGTAAGTATGTATCTAG
TACTCCCT CATTCCAAATTATAAGAC TTTTGGCTTT       TCTAGATA                               
|||||||| |||||||||||||||||| ||||||||||       ||||||||                               A
ATGAGGGA GTAAGGTTTAATATTCTG AAAACCGAAA       TACGTATC                               
        A                  C          AAAAATC        TAAAACGATACGTGAATCTATATGTGATTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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