SE2850487

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9492
  • Sorghum bicolor
  • SE2850487
  • PIF/harbinger
  • To14
  • chromosome_3:10679485-10679731
  • CTA
  • GGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTA               TAATT      GCAAAATGGATACGGTAGCATTTTCGTTTGTATTTGATAAAATATTATCCAATTATGGACTAACTAGGCTCAAAAGATTCGTCTCGTAAATTAC
   GGCCTTGTTTAGTTC     TTTTTT                                                                                              
   |||||||||||||||     ||||||                                                                                              A
   CCGGAACAAATCAAG     TTTAAA                                                                                              
ATC               TTTTT      TATTTTTTTAAGTCTAAAAGACAGTATAGTTTAGAACGTCGCATACGTACCTCGTACTTTATATGTATTTTTTATTGATTAACGTGTTAAACAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3