SE2850576

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9581
  • Sorghum bicolor
  • SE2850576
  • PIF/harbinger
  • To1
  • chromosome_9:8227250-8227486
  • TTA
  • AGGCCTTGTTTAGTTCGTAAAAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               C           ---CA      CCCGTCACATCGAATCTTTGGTCGCATGCATGAAGCATTAAATATAGACGAAAATAAAAACTAACTGCACAGTTTACCTG
  AGGCCTTGTTTAGTT GTAAAAATTTT     AGATTC                                                                                
  ||||||||||||||| |||||||||||     ||||||                                                                                 
  TCCGGAACAAATCAA CGTTTTTAAAA     AACCAA                                                                                
AT               C           ACAAA      TGACATCGTAAAGCAAAAATAAACTGTTTGTAACAGGTTAGTGTCTCATTAATCCGAGTTTTCTAAGTAGAGTGTTTAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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