SE2850586

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9591
  • Sorghum bicolor
  • SE2850586
  • PIF/harbinger
  • To21
  • chromosome_6:48698901-48699084
  • TTA
  • AGGCCCTGTTTGGTTCCACCAACTAAATTTTAGCTAGCTAAATTTTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                                         ----        C    -----   TAGCTAAAGTTCCAAACACATTGACTAA
  AGGCCCTGTTTGGTTCCACCAACTAAATTTTAGCTAGCTAA    ATTTTAGT ACTT     TAG                            
  |||||||||||||||||||||||||||||||||||||||||    |||||||| ||||     |||                            A
  TCCGGGACAAACCAAGGTGGTTGATTTAAAATCGATCGATT    TAAAATCG TGTG     ACT                            
AT                                         TTAA        A    AACTC   GATTACCTTGATTTGATAAAATCGGAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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