SE2850595

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9600
  • Sorghum bicolor
  • SE2850595
  • PIF/harbinger
  • To1
  • chromosome_6:46839572-46839820
  • TCG
  • GGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TC                      G GAAAAGTTTTCGGTACTGTAGCACTTTCGTTTGTTTGTGACAAATATTATCCAATTATGGACTAACTAGGATCAAAAGATTCGTCTCGTGATTTACAGC
  GGGCCTTGTTTAGTTCCGAAAA T                                                                                                   
  |||||||||||||||||||||| |                                                                                                    
  TCCGGAACAAATCAAGTGGGAC T                                                                                                   
GC                      - TTTGGTTTTTCAAAAGTTCTAAGGGGCAGTGTAGCTTAGAACACTGTGTACGTACTTTGTAATTTATATCTGCTTTTGTTTTTGATTAATGTGTCAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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