SE2810603

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9608
  • Sorghum bicolor
  • SE2810603
  • Tc1/Mariner
  • St8
  • chromosome_1:7007369-7007526
  • TA
  • CCCTCTGTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TACCA        -  TCAA                 -          --------G     A   AGCTTTTGCTATGCACCTA
     CCCTCTGT CC    TTATAGGTTGTTTTGGC TTTCTAGGTA         TAGGT CAT                   
     |||||||| ||    ||||||||||||||||| ||||||||||         ||||| |||                   G
     GGGAGGCA GG    AATATCCGGCAAAACCG AAAGATCTAT         ATAAT ACA                   
 ATGA        A  -TTA                 G          ATATTGAAA     -   TAGATCTGTATTGTATATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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