SE2810640

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9645
  • Sorghum bicolor
  • SE2810640
  • Tc1/Mariner
  • St29
  • chromosome_1:73103665-73103933
  • TA
  • TACTCCCTCTGTCCCAAAATAGATGTCG

Secondary structure and sequence

TSD    TIR
5'



3' 
        C                   CTA     TGCGTGCGGGTCAATTTTTCGCAACTTTGACTAAGTTTGAAGAAAATGCGTGCAATATTTGTATCTCCAAATAAGTTTATTATGAAAATATATTCAACG
TACTCCCT TGTCCCAAAATAGATGTCG   TGGGA                                                                                                   
|||||||| |||||||||||||||||||   |||||                                                                                                   C
ATGAGGGA GCAGGGTTTTATCTACAGT   AGAGC                                                                                                   
        A                   --A     GAAGGGCTCTTCAGTTTGTGAAGATTGAAACCGTTTTATATAGATTTTATAATAATTATAAATATTATGTATTAATTATAGTAATCTATCTCCGTATCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3