SE2850672

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9677
  • Sorghum bicolor
  • SE2850672
  • PIF/harbinger
  • To56
  • chromosome_8:52368943-52369223
  • TTA
  • AGAGCATCTCCAAGAGATTAGCTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                          --AACAC    C AATTTAATGATTTAGCTACTCTCTAAAATAGATTCGATAAAAAATATTACAGTAGTCCAATAGACTCTGTAAACGATGGCTAGTGAGATAGGCTATCCAAA
  AGAGCATCTCCAAGAGATTAGCTAAA       TAGC A                                                                                                     
  ||||||||||||||||||||||||||       |||| |                                                                                                      
  TCTCGTAGAGGTTCTCTAATCGATTT       GATT T                                                                                                     
AT                          AGTAAAA    - CCATTTAAATCGATAACAACTTCCTTTTTGCAAAGGTTGTCTGAGACATTTGCTGAGAAGTTTAAATCATCGAGAGATAGGGTGGAATAAGCGAGAGATGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3