SE2850686

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9691
  • Sorghum bicolor
  • SE2850686
  • PIF/harbinger
  • To83
  • chromosome_10:1898606-1898727
  • TTA
  • AGGGCCCGTTCG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            TTTC     TAGAAC          T     A       A  CATTTG
  AGGGCCCGTTCG    TGGGC      GGCCTGGAAC ATTTC GGCCTGG AC      
  ||||||||||||    |||||      |||||||||| ||||| ||||||| ||      A
  TCCCGGGCAAGC    ATTCG      CCGGATCTTG TAAAG TCGGGTC TG      
AT            --CA     TAAGGA          -     G       A  TTTTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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