SE2830724

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9729
  • Sorghum bicolor
  • SE2830724
  • hAT
  • Hat31
  • chromosome_1:70427235-70427370
  • GTGAGGAA
  • CAGTGTTCTTAAGGCGT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTGAGGAA  GT             --          TCCAGGCGACCCCCAGCGCCTTGCAAAATGGT
        CA  GTTCTTAAGGCGT  CGCCTAGGCG                                
        ||  |||||||||||||  ||||||||||                                 
        GT  CAAGAATTCCGCA  TCCGCTCCGT                                
AAGGAGTG  AT             TT          ACTGTTACGCGGTGGCGGACCTGCGGATCCGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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