SE2850726

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9731
  • Sorghum bicolor
  • SE2850726
  • PIF/harbinger
  • To18
  • chromosome_7:58073875-58074119
  • TTG
  • GGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT             T  ATCCTAAAATCCAAAAACTTTT      -  TCCCGTCACATCAAATCTTGTGGCACATGCATGAAGCATTAAATATAGATAAAAAATGATTAATTACACAGTTTAT
  GGGCCTTGTTTAG TC                      CAAGAT TT                                                                            
  ||||||||||||| ||                      |||||| ||                                                                             
  TCCGGAACAAATC AG                      ACTGTG TA                                                                            
GT             T  ----ATTTTTCAAAAACCTAAA      A  TCGTAAAAATAAACATAAACTGTTAATAACAGGTTGGTACCTAGTTCCCAGTTTTCTAAGTAGAGCGTTTAATATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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