SE2850739

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9744
  • Sorghum bicolor
  • SE2850739
  • PIF/harbinger
  • To8
  • chromosome_7:51479572-51479783
  • TTA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
TT     TTGTTTAGATCCCTTCTTCTAAACTTTAGAGCTCTAAACTTTAGAGCTAAAGCTCTAAACAGGTGGTCTAAAATTAGCTCTAAACTTTAGCTCACCTCAC
  AGGGC                                                                                                    
  |||||                                                                                                     
  TAGGT                                                                                                    
       TTTCCACCTGATTCCCGGACAAACCTAGGAGGAGAGATATAAAATCTGAAAATTTTTGAAATCTCGTGAAATCGAGTAAAAACTCCAGATTTCGAGATTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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