SE2850741

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9746
  • Sorghum bicolor
  • SE2850741
  • PIF/harbinger
  • To47
  • chromosome_3:69767655-69767887
  • TAA
  • AGGCCTTGTTTAGTTCCTAAAATTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA            G   - T         -------    ATTTTTCGTCATGATCTTGCGGCACATGCATGAAGTATTAAATATAGATAAAAAAGATAACTAATTGCACAATTTACCT
  AGGCCTTGTTTA TTC C AAAATTTTT       CAAG                                                                               
  |||||||||||| ||| | |||||||||       ||||                                                                               G
  TCCGGAACAAAT AAG G TTTTAAAAA       CGAT                                                                               
AA            A   C C         CCCAAAG    GACATCGTAAAAGCCGAAATAAACTGTTAATAATAAATTAATATCTGATTGATCTGAGTTTCTAAACAGAGCGTTCAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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