SE2850748

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9753
  • Sorghum bicolor
  • SE2850748
  • PIF/harbinger
  • To2
  • chromosome_7:50930332-50930580
  • TAA
  • AGGCCTTGTTTAGTTCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA    C             CCCAAAAACCCAAAATTTTTC     TCTCCGTCACATCGAATCTTTAGACACATGCATGGAGTATTAAATATAGACAAAAACAAAAACTAATTGCACAATTTGTCTGTAATTT
  AGGC TTGTTTAGTTCCT                     AAGAT                                                                                        
  |||| |||||||||||||                     |||||                                                                                        G
  TCCG AACAAATCAAGGG                     TTTTG                                                                                        
AA    A             --------------------C     TAAACCAAAGCTGATGACATCGTAAAAGCAAACATAAACTGTTTATAATAGATTAGTATCTGATTGATCCGAGTTTTCTAAGCAGAGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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