Plant MITE

SE2810749

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_9754
Sorghum bicolor
SE2810749
Tc1/Mariner
St32
chromosome_4:64762554-64762701
TA
TACTCCCTCCGTTCCAAATTATAAGTTTTGGCTTTTCTATATTCATAACTTTTGGTATGCATCTAGATATATGTTATGTCTAGATTCATAGTCAAAGCTATGAATCTAGAAATGCCAAAACGTCTTATAGTTTGGGACGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

                        ---        T      T       A    T G    C           T
TACTCCCTCCGTTCCAAATTATAA   GTTTTGGC TTTCTA ATTCATA CTTT G TATG ATCTAGATATA 
||||||||||||||||||||||||   |||||||| |||||| ||||||| |||| | |||| ||||||||||| G
ATGAGGGAGGCAGGGTTTGATATT   CAAAACCG AAAGAT TAAGTAT GAAA T ATAC TAGATCTGTAT 
                        CTG        T      C       C    C G    T           T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2810749

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2810749