SE2810784

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9789
  • Sorghum bicolor
  • SE2810784
  • Tc1/Mariner
  • St8
  • chromosome_9:48739383-48739532
  • TA
  • TACTCCCTCCATTCCAAATTATAAAACTTTTTGGCTTTCTAGATACATAGTTTTTACTATGTATATAAACATAGTGTATGTCTAAGTGCATAGCAAAATCTATGTATCTAGAAAAGCCAAAACGGCTTATAATTTGGAATGGAGAGAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
     C                  AA T          -            T    A        A  A     G
TACTC CTCCATTCCAAATTATAA  C TTTTGGCTTT CTAGATACATAG TTTT CTATGTAT TA ACATA 
||||| ||||||||||||||||||  | |||||||||| |||||||||||| |||| |||||||| || ||||| T
ATGAG GAGGTAAGGTTTAATATT  G AAAACCGAAA GATCTATGTATC AAAA GATACGTG AT TGTAT 
     A                  CG C          A            T    C        A  C     G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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