Plant MITE

SE2810794

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_9799
Sorghum bicolor
SE2810794
Tc1/Mariner
St33
chromosome_3:57142656-57142804
TA
TACTCCCTCCATTCCAAGTTATAAGTCATTTTGTATTTTTAGGTATAAGCTTTTGCTGTGCAACTAGATATATATTATGTCCAGATACATAGCAAAAACTATGTACCTAGAAAAGCCAAAACGAATTATAATTTGGAACAGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

         CA             G  A     - A            -  C          CAA  A      T
TACTCCCTC  TTCCAAGTTATAA TC TTTTG T TTTTTAGGTATA AG TTTTGCTGTG   CT GATATA 
|||||||||  ||||||||||||| || ||||| | |||||||||||| || ||||||||||   || |||||| A
ATGAGGGAG  AAGGTTTAATATT AG AAAAC G AAAGATCCATGT TC AAAACGATAC   GA CTGTAT 
         AC             A  C     C A            A  A          ATA  C      T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2810794

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2810794