SE2850799

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9804
  • Sorghum bicolor
  • SE2850799
  • PIF/harbinger
  • To3
  • chromosome_4:50379540-50379788
  • TAA
  • AGGCCTTGTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA             -AT      AGATTTTGGATTTCGCTACTATAGCACTTTCGTTTGTTTATGGTAAATATTGTCCAATCATGGACTAACTAGGATCAAAAGATTCATCTCACGATTTACAG
  AGGCCTTGTTTAG   GTGAAA                                                                                                     
  |||||||||||||   ||||||                                                                                                      
  TCCGGAACAAATC   TGGGGT                                                                                                     
AA             AAG      TTTTGATTTTTCAAAAGTTCTAAAAGACAGTGTAATTTAGAAAGCCGTGTACGTACTTCGTAATTTATATTTGTTTTTATTTTTTATTAATGTGTCAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3