SE2810803

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9808
  • Sorghum bicolor
  • SE2810803
  • Tc1/Mariner
  • St8
  • chromosome_2:4330638-4330788
  • TA
  • TACTCCCTCCATTCCAAATTATAAGACGTTTTGGTTTTTCTAGATACATAGTTTTTGCTATGCACTTAGATAT

Secondary structure and sequence

TSD    TIR
5'



3' 
         CA                                      A            CAC        AC
TACTCCCTC  TTCCAAATTATAAGACGTTTTGGTTTTTCTAGATACAT GTTTTTGCTATG   TTAGATAT  
|||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||  A
ATGAGGGAG  AAGGTTTAATATTCTGCAAAACCGAAAAGATTTATGTA CGAAAATGATAC   GATCTGTA  
         AC                                      A            ATA        AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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