SE2850809

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9814
  • Sorghum bicolor
  • SE2850809
  • PIF/harbinger
  • To10
  • chromosome_1:18044407-18044551
  • TAA
  • AGGCCTTGTTTGGATGTAGTCGGATTCACATCAATCCACATGTGTTGGGGTGGATTGGAGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 A           A                            A   GAACTTGA
  AGGCCTTGTTTGGATGT GTCGGATTCAC TCAATCCACATGTGTTGGGGTGGATTGG GTG        
  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||        A
  TCCGGAACAAACCTACA TAGCCTAAGTG AGTTAGGTGTACACAACCTCACCTAATC CAC        
AA                 A           G                            C   ATTAAATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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