SE2850824

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9829
  • Sorghum bicolor
  • SE2850824
  • PIF/harbinger
  • To47
  • chromosome_10:5121191-5121432
  • TGA
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
 T     CTTGTTTAGATTTAAAAAGTTTTTGGATTTTAACACTGTAGCACTTTCGTTTTTATTTGACAAACATTATCCAATCATAGAGTAACTAAGCTTAAAAGATTCGTTTCACGATTT
  GAGGC                                                                                                                  
  |||||                                                                                                                  A
  TCCAC                                                                                                                  
AG     TACGTGGGTTTCGGAATTTTAAAATGTTCTAAGATGTAGTGTAGCTTAGACGAACACCGTGTACGTATTTCGTAATTTATATTTATTTTTTTATTGATTAACGTGTCAATGGAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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