SE2850828

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9833
  • Sorghum bicolor
  • SE2850828
  • PIF/harbinger
  • To32
  • chromosome_1:55509681-55509859
  • TTA
  • GGCTAATTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAC          -GAAGAAGG     GCACAAACAGGGATGAAGGGGGAGGCACAAACAGGGATGAAAAACCCTCCACAAAGAACTAA
    GGCTAATTTG         GGGAG                                                              
    ||||||||||         |||||                                                               
    CCGATTAAAC         TAGGG                                                              
ATTC          TATTGAGTT     GAACCCTAGGGACTGAAAAGGGTCCCACCCTTTAGGTACCTCTTTATTAAACATATTGGTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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