SE2850834

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9839
  • Sorghum bicolor
  • SE2850834
  • PIF/harbinger
  • To2
  • chromosome_4:9765399-9765646
  • TTA
  • AGGCCTTGTTTACTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            C   CACCC     ------ CTAAAATTTTTCAAGATTCTCCGTCACATCAAATCTTTAGACGCATACATGGAATATTAAATATATACGAAAATAAAAACTAATTACACAGT
  AGGCCTTGTTTA TTC     AAAAA      T                                                                                            
  |||||||||||| |||     |||||      |                                                                                             
  TCCGGAACAAAT AAG     CTTTT      A                                                                                            
AT            C   CACTT     TTTAAA CGCTGTGACATCGTGAAAGCAACAAACACCATTAATAACAGGTTGGTACCTGATTCATCTGAGTTTTCTAAGCAGAGCAGTTAAAGCTGGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3