SE2850851

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9856
  • Sorghum bicolor
  • SE2850851
  • PIF/harbinger
  • To2
  • chromosome_3:6723764-6724012
  • TTA
  • AGGCCTTGTTTAGTTACA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               -A  AAACAT        ATAGAAATATTACCACTTT       ATTTGACAAATATTATCCAAACATGTACTAACTAGACTTAAAAGATTCATCTCGTCAATTCCGGTCAAAC
  AGGCCTTGTTTAGTT  CA      TTTGCAAA                   TGTTTGT                                                                      
  |||||||||||||||  ||      ||||||||                   |||||||                                                                       
  TCCGGAACAAATCAA  GT      AAACGTTT                   TCTAAAG                                                                      
AT               GG  CTTTTT        ------------AAAAAAG       GGCAGTGTAGTTTAGAAATCTGCGTACGTATTTCATAATTTATATCTACTTTTATTTTTGATTAACGTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3