SE2850891

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9896
  • Sorghum bicolor
  • SE2850891
  • PIF/harbinger
  • To26
  • chromosome_3:8489657-8489905
  • TAA
  • AGGCCTTGTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA             TTCACCCC      CAAAAAGTTTTTAAAATTCTCCGTCACATCGTATCTTTCGGCACATGCATGAAGCATTAAATATAGACGAAAATAAAAACTAATTGCACAGTTTATCT
  AGGCCTTGTTTAG        GAAAAC                                                                                                  
  |||||||||||||        ||||||                                                                                                  G
  TCCGGAACAAATC        CGCTTT                                                                                                  
AA             ------TA      TTTTAAATCTAAAGCGATGACATCGTGAAAACAAACAAACACCGTTTATAATAGATTAATATATTATTGATCCTAGTTTTCTAAGCAGAGCGCTAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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