SE2850900

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9905
  • Sorghum bicolor
  • SE2850900
  • PIF/harbinger
  • To2
  • chromosome_3:68187236-68187484
  • TAA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                ACCCCAA     AAAAAGTTTTCAAGATTCCCCGTCACATCAAATCTTACGTCACATGCATGAAGCATTAAATATAGACGAAAGCAAAAACTAATTACACAGTTTAGCTG
  AGGCCTTGTTTAGTTC       AAAGC                                                                                                  
  ||||||||||||||||       |||||                                                                                                   
  TCCGGAACAAATCAAG       GCTTT                                                                                                  
AA                -------     TCTAAAGCCTAAAGCCATGACATCGTGAAAGCAAACAAACACTGTTTATAATAAGTTAATATCTGATTGATCTTAGTTTTCTAAGTAGAGCACTAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3