SE2810902

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9907
  • Sorghum bicolor
  • SE2810902
  • Tc1/Mariner
  • St8
  • chromosome_6:53601999-53602151
  • TA
  • TACTCCCTCCATTCCAAATTATAACACGTTTTGGCTTTTCTAGATACA

Secondary structure and sequence

TSD    TIR
5'



3' 
                        C                       CATA            CAC         C
TACTCCCTCCATTCCAAATTATAA ACGTTTTGGCTTTTCTAGATACA    GTTTTTGCTATG   TTAGATATA 
|||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||   ||||||||| A
ATGAGGGAGGTAAGGTTTAATATT TGCAAAACCGAAAAGATCTATGT    CAAAAATGATAC   GATCTGTAT 
                        C                       --AA            AGA         G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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