SE2850925

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9930
  • Sorghum bicolor
  • SE2850925
  • PIF/harbinger
  • To23
  • chromosome_6:60564536-60564849
  • ATA
  • GGGGGTGTTTAGTTCCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATA                  -TTTTT  T     AAATTT      -     -    ATTT  CAAAATGGAACCAAACACCATGCAAAATTTTTGGCAAAAAGGTGGTAACTCTCCATTTTGGATTTTGGCCTCAAGAGGCCAAAAACCCCCAAAAAGAGC
   GGGGGTGTTTAGTTCCCC      TC CAAAA      GGGTTT TGGTC CATC    TG                                                                                                   
   ||||||||||||||||||      || |||||      |||||| ||||| ||||    ||                                                                                                    
   CCCCCACAAATCAAGGGG      AG GTTTT      GTTTTA AGTTG TGAA    AC                                                                                                   
ATA                  TATCTT  -     ----AC      C     A    ----  CTCACTACTTTACGTTTTACGGCTTTAAAACTCCCAGTACAAATCAAGGTAGGTTTTACGTCTTAAATAACGGGAGTGCTCTCGGAGAACTGAGAACTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3