SE2840937

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9942
  • Sorghum bicolor
  • SE2840937
  • CACTA
  • Ca1
  • chromosome_10:1172914-1173100
  • TTT
  • CACAACCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTT   A    CAAT      ATTCTCCTAGTAAGGTGGACTTCTCCTAGTGTTTTAGCATTAAAAATTTAGTATAAACTTTTCCTACTAAAT
   CAC ACCA    TTACTA                                                                        
   ||| ||||    ||||||                                                                        G
   GTG TGGT    TCACCT                                                                        
TTT   A    TTTA      TAAGAGGATCATAAAAATTCATCAATATTTTATGATGGTAATCAGTTTTGTCATCCTTTAGGATGATCCTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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