SE2850977

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9982
  • Sorghum bicolor
  • SE2850977
  • PIF/harbinger
  • To33
  • chromosome_8:43067373-43067583
  • ATA
  • GGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
   ATAGAAGGA    CGCAGT      G             A               C                        A      G    T      A AAGA
            GGAA      TTTTTT CCCTCAAGGGCAT TGCTCCCACTCTCTC ACCACTGGATTCGCATTGAGAAGT TGCAAA ACAC TCTCAA G    
            ||||      |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||| |     
            CCTT      AAAAAA GGGAGTTCCCGTA ACGAGGGTGAGAGAG TGGTGACCTAAGCGTAACTCTTCA ACGTTT TGTG AGAGTT C    
AGAGGAAGATAC    -TTAAT      -             C               A                        C      G    T      A ACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3