SE2810983

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9988
  • Sorghum bicolor
  • SE2810983
  • Tc1/Mariner
  • St8
  • chromosome_1:52951912-52952052
  • TA
  • TACTCCCTCCGTTCCAAATTATAAGACGTTTTGGCTTTTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
      CTC    C                     T      --AAT     GCTTTACAGACATAGTGTA
TACTCC   CGTT CAAATTATAAGACGTTTTGGC TTTCTA     GCATT                   
||||||   |||| ||||||||||||||||||||| ||||||     |||||                   T
ATGAGG   GCAA GTTTAATATTCTGCAAAACCG AAAGAT     TATTG                   
      CAC    A                     T      CTTTA     AAAACGATACGTGAATCTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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