SE2831008

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10013
  • Sorghum bicolor
  • SE2831008
  • hAT
  • Hat67
  • chromosome_1:24453086-24453286
  • AGAACAAG
  • CAGTGGCGGATCTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
AGAACAAG   T      T    AAACAA   AAGGGGGGGCTAAAAATACTGTAAGGTATTTTTATGGCACATCAGATAGGGCTAAATCTATATTTTTATTA
        CAG GGCGGA CTAG      CTC                                                                       
        ||| |||||| ||||      |||                                                                       T
        GTC CCGTCT GGTC      CGG                                                                       
GAACAAGA   C      T    ------   GGCCTGACGGACCCGACGTCGGGCCCCGCACCGGGTCTTTAGGGAAAATATCAAGGAAATAGGTCGGATTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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