SE2811009

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10014
  • Sorghum bicolor
  • SE2811009
  • Tc1/Mariner
  • St40
  • chromosome_6:59878035-59878199
  • TA
  • TACTCCCTCTGTCCCACTTTAAACGTCGTTCTAGCACT

Secondary structure and sequence

TSD    TIR
5'



3' 
               ACT     C      C    A  ACT   ACCTGTCTAAGTTCAGACCATATAGCAGGAATCTAGACGT
TACTCCCTCTGTCCC   TTAAA GTCGTT TAGC CT   TTT                                        
|||||||||||||||   ||||| |||||| |||| ||   |||                                        A
ATGAGGGAGACAGGG   AATTT CAGCAA ATCG GA   GGA                                        
               CAT     A      C    -  ---   TAGTCCACGTACGAGGAACGACACTTGAACCTACAACGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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