SE2851024

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10029
  • Sorghum bicolor
  • SE2851024
  • PIF/harbinger
  • To73
  • chromosome_10:49473774-49474070
  • TTA
  • AGGCTATCTCCAACAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                -  -         -    AACCCAAACCTAAAATGGGTCTCCAACACAATACCTATAGCCTCCAACAGAGTACCCATACAGAAGACCTATTTTGGGTATCAGGAGAGGCATAACCCAAATTTGGGTATCCTC
  AGGCTATCTCCAACAG GG AGACCCATT TGGG                                                                                                                  
  |||||||||||||||| || ||||||||| ||||                                                                                                                   
  TCTGATAGAGGTTGTT GC GTGGGTTTT TGTT                                                                                                                  
AT                A  A         A    CTGGGTAAACAGGAAACCCATCGCGATGTCCATTTTCCAAGGTATGGATAAAAATCAGAAGAGGTTGTTGTTCTGGATTTTCTGTTGTGAGAGACGTTTACCCAGAGCTCCTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3