SE2811034

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10039
  • Sorghum bicolor
  • SE2811034
  • Tc1/Mariner
  • St8
  • chromosome_1:21077990-21078140
  • TA
  • TACTCCCTCCGTTCCAATTTAAGGTCGTTTTGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
    -    C        T   -     G       ATT    C   -     CTTTTATTATGTATCTAGACATAT
TACT CCCT CGTTCCAA TTA AGGTC TTTTGGC   TCTA ATA CATAA                        
|||| |||| |||||||| ||| ||||| |||||||   |||| ||| |||||                        T
ATGG GGGA GCAGGGTT AAT TCCAG AAAACCG   AGAT CCA GTATC                        
    T    C        T   A     A       AAA    -   C     GAAAACGATACTTGGATCTATACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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