SE2851063

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10068
  • Sorghum bicolor
  • SE2851063
  • PIF/harbinger
  • To69
  • chromosome_5:33561024-33561271
  • TAA
  • AGGCCTTGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA          T      GAAAACTTTTTAGTTTTCGAAACTGTAGCACTTTCGTTTCTATTTGACAAACACTATCCAATCATGGAGTAACTAGGCTTAAAAAATTCATCCACGATTTTACAG
  AGGCCTTGTT AGTTTC                                                                                                         
  |||||||||| ||||||                                                                                                         G
  TCCGGAACAA ATCAAA                                                                                                         
AA          -      TGGGTTTTTGATTTTTGAAAAATTCTAAGGAGCAATATAGCTTAGAACGCCGTGTACGTATTTCATGATTTATATCTATTTTTATTTTTAATTAACGTGTCAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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