Plant MITE

SE2811094

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_10099
Sorghum bicolor
SE2811094
Tc1/Mariner
St16
chromosome_2:64782174-64782322
TA
TACTCCCTCTGTTCCAAATTACAAGTCACTTTGACTTTTTCGGTTCATCCATTTTGCTATGCATCTAGACATA

Secondary structure and sequence

TSD TIR

5'

3'

          G  C       C     AC          T    T   C                    C   TT
TACTCCCTCT TT CAAATTA AAGTC  TTTGACTTTT CGGT CAT CATTTTGCTATGCATCTAGA ATA  
|||||||||| || ||||||| |||||  |||||||||| |||| ||| |||||||||||||||||||| |||   
ATGAGGGAGG AA GTTTAAT TTCAG  AAACTGAAAA GTTA GTA GTAAAACGATACGTAGATTT TAT  
          G  C       A     CA          -    T   A                    A   TA

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2811094

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2811094