SE2831103

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10108
  • Sorghum bicolor
  • SE2831103
  • hAT
  • Hat34
  • chromosome_1:52689852-52690034
  • GTGTAACA
  • TGTAACACAGTGGCGAAGCC

Secondary structure and sequence

TSD    TIR
5'



3' 
G   A    - G     A    AGAAGATTTCA  A   C  A AA TCTCATTAAGCAAAAATATTTAACTATAAAATCACATAATTTTATATAAATAT
 TGT ACAC A TGGCG AGCC           CG GCC GG C  T                                                     
 ||| |||| | ||||| ||||           || ||| || |  |                                                     A
 ACA TGTG T ACCGC TCGG           TG GCG GG C  C                                                     
    A    G G     C    -----------  -   -  - -- GGTGGGGCCCGCCGGCCGGCCCGAGGAGCGGTTTTACGTTTTCTTTAGAAGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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