SE2851105

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10110
  • Sorghum bicolor
  • SE2851105
  • PIF/harbinger
  • To1
  • chromosome_3:25917057-25917305
  • TTA
  • AGGCCTTGTTTAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT   C           ACAGCCAAAAACCTAAAACTTTA      TCTCCATCACATCGAATCTTGCGGCACATGCATGGAACATTAAATATAGATAAAAATAAAAACTAATTACACAGTTTGTCTGTAAATCGC
  AGG CTTGTTTAGAT                       CAAGAT                                                                                          
  ||| |||||||||||                       ||||||                                                                                           
  TCC GAACAAATCTA                       GGTTTT                                                                                          
AT   T           -----------------------      TAAAAAACCTAAAACTGTGACATCGTAAAAGCAAAAATAAACTGTTTGTAACAGATTAGTACCTCATTGATCCGAATTTTCTAAGCAGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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