SE2851112

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10117
  • Sorghum bicolor
  • SE2851112
  • PIF/harbinger
  • To3
  • chromosome_1:48452293-48452540
  • TAA
  • AGGCCTTGTTTAGTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 ACCCAAAAACCAAAAACTTTTCA    TTCCTATCACATCAAATCTTGTGGCACATGTATGGAGCATTAAATATAGATAAAAAATTAACTAATTGCACAGTTTGCCTGTAATTT
  AGGCCTTGTTTAGTTCC                       AGAT                                                                                       
  |||||||||||||||||                       ||||                                                                                       G
  TCCGGAACAAATCAAGG                       CGCT                                                                                       
AA                 -------------------GATA    TTTTTTAAACCAGTGACATCGTGAAAGCAAACATAAACTGTTAATAATAGGTTGGTATTTGATTGATCTGAGTTTTCTAAGCAGAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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