SE2851114

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10119
  • Sorghum bicolor
  • SE2851114
  • PIF/harbinger
  • To2
  • chromosome_9:2164790-2165038
  • TAA
  • AGGCCTTGTTTACTTCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA            -C     CCCAAAAACCCAAAATTTTTT    TTCCCCATCACATCGAATCTTTAGACGCATGCATAGAGTATTAAATATAGACGAAAATAAAAAATAATTGCACAGTTTGGTCGGAATT
  AGGCCTTGTTTA  TTCCA                     AAGA                                                                                        
  ||||||||||||  |||||                     ||||                                                                                         
  TCCGGAACAAAT  AAGGT                     CTTT                                                                                        
AA            CA     ------------------TTC    TTTAAAGCGCTGTGACATCGTGAAAGCAAACAAACACTATTAATAACAGATTGGTACCTGATTGATACGAATTTTCTAAATAGAGCAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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